rs108531619 SNP Detail

Summary

• ID
  rs108531619
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161321438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTACTAATG TTTGCTAAAT TCTAGTAATA TATTTGCAGG
  TCTTTTTAAA AAATATATTT ATTTTATATT TATACATTTT TGCCCACATA TATGTATGTG
  Y
  ATCATGTGTG TCTGATCCCT TGAGGGTCAG AAGATGGAGT TGGATTCCCC GGCACTGGAG
  TAATAGGCAG TTGTTAAACA CCACACTGTG GCTGGGAAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145915192	ENSMUSSNP3599668	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108531619					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161321438 () rs orientation: forward

Symbol	Name	Function Class
Rr421810	regulatory region 421810	467 bp proximal
Tnfsf18	tumor necrosis factor (ligand) superfamily, member 18	786 bp upstream
Tssr9690	transcription start site region 9690	780 bp upstream