rs108536525 SNP Detail

Summary

• ID
  rs108536525
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:55493758 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTGATTG AAATGGTAAT
  TTCAGGGCAG GTTCCCCACC CAACTAACTT ATTTTCTGTG CTTAATGAAG GCAGATAGAT
  CTCTGAATTC TGTAGAGGTT TGTGTTCCCA TGCTAATTAT GCTACCCAAA AATCCGTTTG
  CCATGTCCCA CCCGTAGAAC TAAAGGAAGC CTGTCCACAC TTAGGTTTGC TTGTTTGTTT
  K
  TTTGTTTGTT TGTTTGTTTG TTTGTTTTTC GACAGGGTTT CTCTGTGTAG CTCTGGCTGT
  CCTGGAACTC ACTTTGTAGA CCAGGCTGGC CTCGAAATCA AAAATCTACC TGCCTCTGCC
  TCCTGAGTGC TGGGATTAAA GGCATGCACC ACCATGCCTG GCCACACTTA GTTTTTCACT
  GGTCAATAAA GTTACTGGCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145790220	ENSMUSSNP3427903	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108536525					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:55493758 () rs orientation: forward

Symbol	Name	Function Class
Rr392767	regulatory region 392767	within coordinates