rs108542393 SNP Detail

Summary

• ID
  rs108542393
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23005183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ATTTGTTTTG GAGAAACTGG ATAGAATAGT GTCTAGGGCA
  GATAAAAAGG ATCCACTTAT TGGCACATGC CATGATCCTG TTCAGATACT TAATATGGGG
  R
  AAAGGGGGAA TGTTTCTGTT TTTTCCCCAG AATGCTACAA GAGCATACTA GCTTCCAATG
  TGACAGGCTG ACCTGTGACC TGTGAGTGCC CTGACAGTGG T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148803504	ENSMUSSNP429992	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108542393					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23005183 () rs orientation: forward

Symbol	Name	Function Class
Rr285916	regulatory region 285916	406 bp proximal
Rr285917	regulatory region 285917	1675 bp proximal