rs108551876 SNP Detail

Summary

• ID
  rs108551876
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:80038527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGCTACCC CAGTTCCCAC
  GGCAGTCACA GTTCTGGTGG GCCTTTGTTG GGCCGGGAGT GCTCACTCCT AATGCATGGC
  CTTTTATTCA CCCCTTACTT ATTCAGACCC TCTAAACTGG CTGCTGTCAT CACCTCACAG
  GCTTGTCCAT GAGAGGAAAC TGAGGCATGG AGACATTCAG GCGTCTGGCC AGTCATAGGC
  W
  GGTGATGGAC CCAGACGTCC TCAATCTAGA ACATGTGTCC TTTACCACTG TCTAGCTTGG
  GTGGGGAACA TCTCAGAAGT GTCTGTGTGG TGCCAGTCCA GCATTGTGTC ACAGCCAGAG
  ACTCCCTCAG CAGGTGCCAG GACTGGCTAA GTTAACAGTC CTTCCCTCCC AGTCTGAACA
  TCCAGTGCTT AAAAGCTTTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148214173	ENSMUSSNP903208	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108551876					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:80038527 () rs orientation: forward

Symbol	Name	Function Class
Rr308002	regulatory region 308002	927 bp distal
Rr310675	regulatory region 310675	1891 bp proximal
Rr314587	regulatory region 314587	127 bp distal
Tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	within coordinates