rs108559417 SNP Detail

Summary

• ID
  rs108559417
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:86489437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GCAGGGGATT CTGTTTTGGG AATGGTTATA CACTAGGGAC
  TTGCCTTTCT GACCAACCAT TTATTATAAA ACATCCGAAT TGGGACTCAG AAATGTTCAG
  Y
  CAATCAGTTC CCTTGTAAAG AAATCAAAGA TCTGCTTCTA TCTTAGTGAC AGTCTGTCTC
  CAAACAAAGG CTTTTCTATA CCTCATTCAG TTGGCTTAAA C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146862987	ENSMUSSNP5524601	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108559417					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86489437 () rs orientation: forward

Symbol	Name	Function Class
Or8k38	olfactory receptor family 8 subfamily K member 38	Intron