rs108562308 SNP Detail

Summary

• ID
  rs108562308
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:70868329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTCACTCC ATGTTGGTTC
  TAGAGAAAAC TCCACGAATA ACGCAATATT ATTTCAGTTT TTCTAAATGA GAGTGGACAG
  GGGACTGATG GGCAGGGGAT GTGTAGCTGT TGTTATTTTA CTGCTGGGTT CCCTTGGGTC
  TCTGCGCATT TGTCACGTGA CTGTTGTATC CACTTAGTAC GCACTTAACT TCAAAATCGG
  R
  AACTGCATCT ATGCTTCCAG TGCCACAGAG ACAACTAGGC ATTCTGTGGT TCGCAAACTG
  CAGGGACGAG TACCCCTTGT GGACTTCTCC GTGACAGGAT ATAATCACAC CCCATATGTG
  CTGTAAGGTG ACTCAGAACC CAAGACTTCA CAAAAGATAA TGAAAGAGAG CAGGGTCAGT
  TTGCTAGGTC AGTGCCACGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325439546	CHEV_17_70910674	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108562308					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:70868329 () rs orientation: forward

Symbol	Name	Function Class
Dlgap1	DLG associated protein 1	within coordinates
Rr342743	regulatory region 342743	within coordinates
Tssr145664	transcription start site region 145664	405 bp upstream