rs108564238 SNP Detail

Summary

• ID
  rs108564238
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:98217780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TGACAAAAGA TCTCTCACCT GGATCTGAGG CTGATCAATT
  AGACTAGATT GGCTGTCCAG CAAGGCTCAG GGATAGTTCT GCCTCTGCTT CCTAATTATA
  Y
  ACACACACAC ACACACACAT ACACACACAT ATATATATAC TTTATATCAT GTACATATAT
  CAAGACTGTC TCAAAAAGAA AAGCCAACAG AGAAAACACA G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134253618	ENSMUSSNP3433720	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108564238					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:98217780 () rs orientation: forward

Symbol	Name	Function Class
Rr692640	regulatory region 692640	1458 bp distal