rs108585741 SNP Detail

Summary

• ID
  rs108585741
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69062329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATTTTGGT CCATTGTGGG
  CTTCCTTTCT GTGTGATGTT ACAAGTGTGA TTGGTGTGTG TGTGTTGCAT CTCCACAGGA
  AAAATTGTCA CACAACAGGG TCTGGATAGA CGTCTCACTT AAGATCAGAC TCAGAAAGCC
  CTCATAGAAC TACTCTGGGG TTGGAGAGAC CTATGGCTCA GCACTTGAAC ACCTACAGAC
  S
  CTCATAACTG TGCAGAACTC CAATATTAGG GGATCTGATG CCACCTTCTG ACCTCCATAG
  GCACTAGGCA CACATGAGGT GCACAGACGT ATATGTGAGC AAAACATACA TAGAAAATAA
  ATCTAGAAAA CCAATCAAAC CCTGCACCCC GGGGGGGGGG GGGGCGGTGG GAAGCCTGGA
  GCTCTGAGTC CTACCCACTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132350434	ENSMUSSNP6787837	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108585741					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69062329 () rs orientation: forward

Symbol	Name	Function Class
Alox12b	arachidonate 12-lipoxygenase, 12R type	1712 bp downstream
Gm72238	predicted gene, 72238	917 bp upstream
Rr235742	regulatory region 235742	72 bp proximal
Rr251246	regulatory region 251246	129 bp distal
Rr251247	regulatory region 251247	within coordinates