rs108587291 SNP Detail

Summary

• ID
  rs108587291
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:157396445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCT AGGCACCACA CTGTCCAAAC
  Y
  CACTCTCTGC TCTTGCCCAA TTCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145824148	ENSMUSSNP7095041	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss320074422	CHEV_1_159499006	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108587291					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:157396445 () rs orientation: forward

Symbol	Name	Function Class
Rr421413	regulatory region 421413	808 bp proximal
Sec16b	SEC16 homolog B, endoplasmic reticulum export factor	450 bp downstream