rs108593253 SNP Detail

Summary

• ID
  rs108593253
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:3209525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACGACTTT AAACCCAGCA CTTGGGAGGC AGAGGCAGGC
  GGATTTCTGA GTTCGAGGCC AGCCTGGTCT ACAAAGTGAG CTCCAGGACA GCCCGGGCTA
  Y
  ACAGAGAAAC CCTGTCTCGA AAAACCAAAT AAATAAAAAT AAATAAATAA ATAAATGAAT
  GAAGGAGGAA ATCATTGCAG GGATACAGGG TATGACGGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148163283	ENSMUSSNP4726198	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108593253					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:3209525 () rs orientation: forward

Symbol	Name	Function Class
AU018091	expressed sequence AU018091	within coordinates
Rr156086	regulatory region 156086	676 bp proximal