rs108593534 SNP Detail

Summary

• ID
  rs108593534
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:33255220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGTGGGAGTG GGTGGGTAGG GGAGGGGGCT TTTGGGGGAC
  TTTTCGTATA TCATTGGAAA TGTAAAGGAG GAAAATACCT AATTTAAAAA AAAAGAAAAG
  T
  TCTTATGAAA ACCTACTGAT GTGGAAGCTT CCCCAAATAT GAACACACAC ACACACACAC
  ACACACACAC ACACACACAC ACAAAACCAC TTCTTGAGTT A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134149155	ENSMUSSNP567246	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108593534					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:33255220 () rs orientation: forward

Symbol	Name	Function Class
Rr394910	regulatory region 394910	185 bp upstream