rs108598106 SNP Detail

Summary

• ID
  rs108598106
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32902637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGAAGCA AATCTCCCTC
  ACCATCTCCG AAAACCTCCT CCAAACTGAA TCTCCCTCCC TTCTACTTCC TATGCATCTT
  TCTATCCATC TTCCTGACTT CCTGTTACTC TCTATGGCTT TTTCTTAATA ATCCTATGTT
  CACTTCCGGT CAACTGGTTG CTTGCTCTGC CTCTTGACCT AAGATTGACT TTATTTAATC
  Y
  TGTTTACAGT ATTCAAGCAC AAAGCTCTTG GATTAAAGGT GAGTGCTAAG GTGGAGCCAA
  GTCACAACTA TAAACAGGTT TTTCCAGTAA ATTACACTAT CTCAAGGTTC ACAGTGTTAT
  CAAATATCCT GCAACAACAA AGTCGTCAGA TGCCTTAGAC TATGGGAGAT GTAGCTCACT
  CAAACGACGA CACTTTAATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362834	CHEV_17_32820608	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108598106					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32902637 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	1968 bp upstream
Rr339615	regulatory region 339615	1963 bp proximal
Tssr143733	transcription start site region 143733	1922 bp upstream
Tssr143734	transcription start site region 143734	1947 bp upstream
Tssr143735	transcription start site region 143735	1976 bp upstream
Tssr143736	transcription start site region 143736	1992 bp upstream