rs108598367 SNP Detail

Summary

• ID
  rs108598367
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85438865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCG ATATAAGGCA GTGAGGGGAA
  G
  AGAGAGAGAG ACAAATTGTT TCCCA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145392458	ENSMUSSNP755891	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322751425	CHEV_8_87236135	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108598367					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85438865 () rs orientation: forward

Symbol	Name	Function Class
Nfix	nuclear factor I/X	within coordinates
Rr178193	regulatory region 178193	665 bp distal
Rr178194	regulatory region 178194	336 bp proximal
Rr187003	regulatory region 187003	within coordinates
Tssr82128	transcription start site region 82128	1557 bp downstream
Tssr82129	transcription start site region 82129	1576 bp downstream
Tssr82130	transcription start site region 82130	1597 bp downstream