rs108598578 SNP Detail

Summary

• ID
  rs108598578
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:182820992 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TAGGGTTCAG GCAACCTCCT CCACTTTTGG CTACCGCCAT
  GATTTAGATC TTGAACAGAC CCCATTCCCA AAGCTCACCT ACTACAGGTC CACGCCACGG
  G
  GAGGCAGAGC CTGGTGGAAG GAAGCTAGAT CACTGTTGGA GTGTGGTTAG CCTAGGTGGA
  TATTGGGACA GTACAGTCTC TTCCCCCTCT TTGCTTCCTT G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss136165884	ENSMUSSNP5263363	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108598578					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:182820992 () rs orientation: forward

Symbol	Name	Function Class
Rr425028	regulatory region 425028	1597 bp distal
Rr425030	regulatory region 425030	1109 bp distal
Rr425031	regulatory region 425031	1474 bp proximal