rs108601353 SNP Detail

Summary

• ID
  rs108601353
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183849437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGGGGACTAT CCACCTACAG AATAACAGAA CAATCTCTTG
  GCTCAAAACA GCAGCAGCAG CAGCAGCAGC AGCAGCAGCA GCAGCAGCAG CAACAACAAC
  R
  ACGACAACAA AACATTCAAA ACCCCAAGAC AACACAAGGC TATCCCAATG GTTCTGATCT
  CCTGCCTATT CAGAGAGAAA GTGGGAGCTG GGCTGCTCAG A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146417567	ENSMUSSNP2988946	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108601353					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183849437 () rs orientation: forward

Symbol	Name	Function Class
Gm69596	predicted gene, 69596	1034 bp upstream
Rr425179	regulatory region 425179	783 bp proximal
Rr425180	regulatory region 425180	1045 bp proximal
Tssr10581	transcription start site region 10581	1032 bp upstream