rs108602042 SNP Detail

Summary

• ID
  rs108602042
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6877161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AATGTTGTCC TTATAAGAGT TGCCTTGGTC ATGGTGTCTG
  TTCACAGCAG TAAAACCCTG TTGCGGCCGG CCTGCAGCTC GCAATGAACG GTTCAACTGA
  G
  ATGGCAACTC GGGCAAGGTG TGTGTCAAAC ACTTGCTCTT CATCTGGCAG TGACATTTGG
  GGAGGATCTG GGAACTTGGA GGTGGAGCGT GCTGAAGGAA G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss145092601	ENSMUSSNP3286488	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs108602042					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6877161 () rs orientation: forward

Symbol	Name	Function Class
Dynlt1c	dynein light chain Tctex-type 1C	83 bp downstream
Tmem181c-ps	transmembrane protein 181C, pseudogene	341 bp downstream