rs108604535 SNP Detail

Summary

• ID
  rs108604535
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:10377046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTCTTTAG CTTGGCTGAC TGTGCACTAC TGACCAAGTT
  TTTTTGACCA AAGTGAGAAA AACATGCTAT CTTTCAGAAA CTTTTACTTT AAAAAAAAAA
  W
  AATTCCACAA ACCATGGTAC AAGTTTAGAT CAGTGGATAG CTTCCAGCTG TCAGGTTTTC
  CCTTCTACCT TGTGAACCCC AGGGATCAAC CTCAGGTTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss134581208	ENSMUSSNP1095186	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss320653422	CHEV_3_10311986	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108604535					SNP	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10377046 () rs orientation: forward

Symbol	Name	Function Class
Impa1	inositol (myo)-1(or 4)-monophosphatase 1	within coordinates