rs108614405 SNP Detail

Summary

• ID
  rs108614405
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32904540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATCTCTC CTGCCCTCAA
  CCTCCATCCC CATGCCCATC CTCCATCCCA CCCCCCCACC CCCCGCCCTC CCCCATGATG
  TGAGAGGGAA CAAGTTCTAA GGCTCTGGTG TTCATGCTGT GACCCTGAAT TGATTTCACT
  CTGTACCCTG CTGACCCAAC CCCCTCCTTT TGGCCTTCTG CCCCAGAGGG GAGGAGGCAG
  W
  TGGGCCTGTG AAGGATTGGC TGACACAACT GAGCTCAGCC TCCTTCAGAG CAGAAGCCAG
  GAACAAAGAA ACTCTAAAGG AAGGAGAACC GTGGGAAACT CACTGTTCCT GAGAGAAGGT
  GCCTGGCTAA GAGTAGGTTA AAGAGAACTC TAAGCCTGAA CCTGGCTGCT TATTTCTAGA
  TAACCAGCTA TCTGAAGCCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362847	CHEV_17_32822511	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108614405					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32904540 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	65 bp upstream
Rr339615	regulatory region 339615	60 bp proximal
Tssr143733	transcription start site region 143733	19 bp upstream
Tssr143734	transcription start site region 143734	44 bp upstream
Tssr143735	transcription start site region 143735	73 bp upstream
Tssr143736	transcription start site region 143736	89 bp upstream
Tssr143737	transcription start site region 143737	527 bp upstream