rs108622133 SNP Detail

Summary

• ID
  rs108622133
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:115090334 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGATGCC CTCAGCTGGG
  TTCATGCAGA AGATGGCCAG ACTGGCCCCA ACCTGAATGG ATCCCAGCCT CTGGTCTGGC
  AAAGTTCTCT TGTCTCTGTT CTTGCTTTCA CAAGACCCTC CGAGATTCTT TGACACTGGT
  GTTGCTTTCC ACTCACCTGT GCTAATGAGG TGATCCCGAG GTCCTGCAGC ATGGAGAGCA
  T
  TCTGGATCCC TTAGTAGCCC CTGCTGGGCT CAGAAGGAAG ATGGTGGGAG TGGTCCCAAC
  TAGAATGGAC CCCAATCTCT GGTCTGGTGG GATTCCTCCA TCCATTTTCC TGCTGGCAGA
  AGACCCTCTG TGATTCTTTG AAGCTGATGT TGCATTCCAC TCACCAGTGA TCCCGAGGTG
  ATCCTTAGGT TCTGAGGTGT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss138817723	ENSMUSSNP6182573	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs108622133					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:115090334 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Rr387812	regulatory region 387812	1003 bp upstream