rs108625573 SNP Detail

Summary

• ID
  rs108625573
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:57870023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCAAAGGA AAGAAGACAG
  ATGTGCCCAA GTCTGGGAAA GCATGAAAAT ATCACAGAAA GAGGTGATAG TGTGGGACAC
  AGAGTAACCA AAACTTGTAA GATATGTGCG AGAGTTGGAA TGTTCATGCT TTTTCCAAAA
  TCCACCAGAG AGCTTACTCC GAGGCGCACA GCTAAGGAGA GGCAGGGGTT TTATGAGCTG
  Y
  TTAGGCCTTG AGGACTCAGC TTTAGAAAAG GGACAGTTGG AGTCGGGCCT CAGGGTTCAA
  GGTGCTGCCT TGGAAGTATA GACCAGGCCC TCAGCACACA CAACGAACAC CCAGGCAGGG
  TCTCTATCAC AAACATCCCT GGCTCTAGAA TTGTGAGAAA TCACTCACAA TTATTTATGG
  GTTACCCACT TTACTGTATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss137785068	ENSMUSSNP6687750	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108625573					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:57870023 () rs orientation: forward

Symbol	Name	Function Class
Rr256918	regulatory region 256918	578 bp proximal