rs108625686 SNP Detail

Summary

• ID
  rs108625686
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121425297 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATCCTGTGAA CGCTGTATAA TCTTTTGCTC CAGTCTGGAA
  TGCCACAGCT AAGGAATTAG AAAGTGAGGA TTGCCATCTT GGGATGAGTC TGTATTTAAC
  A
  CAAAATAAGC AGAGCCCGGC AATGAGAGGC ACCAGGTCTT CTGAGGGCTC AGGTCCTTCA
  TTAGCACATG GGTGGGAAGA TACCCATGTG CTGATGCACT G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss137068120	ENSMUSSNP3240045	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs108625686					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121425297 () rs orientation: forward

Symbol	Name	Function Class
Gm57058	predicted gene, 57058	318 bp downstream
Lyzl4	lysozyme-like 4	within coordinates
Lyzl4os	lysozyme-like 4, opposite strand	within coordinates
Rr199243	regulatory region 199243	1297 bp distal
Rr199244	regulatory region 199244	897 bp distal
Tssr92055	transcription start site region 92055	978 bp downstream