rs108625728 SNP Detail

Summary

• ID
  rs108625728
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32746604 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGCCAGTAC TGTTTATGCA TTACAGGTGT GTGTATGTGT
  GCGTGTGCAT GTGCGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGC GCGCGCGCGC
  R
  CGCACGCTCG AGAGTGTGTG TGAAGTCCAT GGCATGTGTG GAGGTTAGAA GACAACTCTT
  GGATAGGAAT TGGTTCTCTC TTCATACTTT GTGTGGTCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss145473271	ENSMUSSNP5344161	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs108625728					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32746604 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8980	CpG island 8980	969 bp proximal
Cyp4f17	cytochrome P450, family 4, subfamily f, polypeptide 17	within coordinates
Rr405183	regulatory region 405183	1143 bp upstream
Rr525770	regulatory region 525770	1328 bp proximal