rs108628892 SNP Detail

Summary

• ID
  rs108628892
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79151732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTAGCTGCCA GAGGCTGTTC ATGTGAAGAG AGACCAGGAG
  GCAGAGAGAG AGAGGGCTGT AACAGAGCCC TCAAAGGCCC ACTGGAGTGG CTCAGTTCCA
  Y
  GGGCCAGGCC CCACTCCTTT CTCTTCATGG ATGATGCCCA CAAGTGTATT CTAAAGCGGC
  CTCTTCTGAG AACGTCACGG ATGAAAGCCA GTGGGTGAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss139802698	ENSMUSSNP5780094	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108628892					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79151732 () rs orientation: forward

Symbol	Name	Function Class
Rr293691	regulatory region 293691	within coordinates
Rr293692	regulatory region 293692	268 bp proximal
Rr369884	regulatory region 369884	1 bp upstream
Vwa8	von Willebrand factor A domain containing 8	within coordinates