G ATGGGGGTCT CGTCTCTGTG GGACTAGAAA GTGTCCCAAC AATCTGAACA AGGTAACAGA AAGTTACAAA AGTTAAGAGA AGAACAGGGT AAGTTGGTAA A AAAGTTAGTG TAAGTAGATA AGAAAGTGCA GAGGAGGAGA AACAAAGGAA AGATAGAGGT CTGCAAAGAA GTGAGCTAAA AGCAAATCTT CAGCAGACCC A A = A Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
---|---|---|---|---|---|---|
ss145288292 | ENSMUSSNP6939296 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A |
SNP Consensus Information | ||||||
SNP | Consensus Type | 129X1/SvJ |
||||
rs108645520 | SNP | A |
Location: Chr17:21695526 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm52290 | predicted gene, 52290 | within coordinates | ||||||
Gm56906 | predicted gene, 56906 | within coordinates | ||||||
Rr392397 | regulatory region 392397 | 266 bp downstream | ||||||
Rr522959 | regulatory region 522959 | 1103 bp distal | ||||||
Rr522960 | regulatory region 522960 | 1560 bp distal | ||||||
Rr522961 | regulatory region 522961 | 507 bp distal | ||||||
Rr522962 | regulatory region 522962 | 209 bp distal | ||||||
Rr522963 | regulatory region 522963 | 870 bp proximal | ||||||
Tssr142877 | transcription start site region 142877 | 1398 bp downstream | ||||||
Tssr142878 | transcription start site region 142878 | 991 bp downstream | ||||||
Tssr142879 | transcription start site region 142879 | 342 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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