rs108649367 SNP Detail

Summary

• ID
  rs108649367
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:70111405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCAG TCCCTGGCCG CGCGTCCTCC
  G
  CTACGTGCTG GGACAGGCAG CGCTG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148299049	ENSMUSSNP2984987	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs108649367					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:70111405 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8364	CpG island 8364	within coordinates
Gbe1	1,4-alpha-glucan branching enzyme 1	within coordinates
Rr517848	regulatory region 517848	443 bp distal
Rr517849	regulatory region 517849	1353 bp proximal
Tssr138939	transcription start site region 138939	541 bp downstream
Tssr138940	transcription start site region 138940	514 bp downstream
Tssr138941	transcription start site region 138941	501 bp downstream
Tssr138942	transcription start site region 138942	446 bp downstream
Tssr138943	transcription start site region 138943	421 bp downstream
Tssr138944	transcription start site region 138944	368 bp downstream
Tssr138945	transcription start site region 138945	19 bp downstream
Tssr138946	transcription start site region 138946	150 bp upstream
Tssr138947	transcription start site region 138947	1231 bp upstream