rs108651286 SNP Detail

Summary

• ID
  rs108651286
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:45853850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAAA TGAGAACAAG ACATTCAGGT
  R
  CCAGTTGGCC AAGAACTGAG GCCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325403369	CHEV_17_45679873	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108651286					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:45853850 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9190	CpG island 9190	1725 bp proximal
D17Mit35	DNA segment, Chr 17, Massachusetts Institute of Technology 35	252 bp distal
Rr527420	regulatory region 527420	745 bp proximal
Tcte1	t-complex-associated testis expressed 1	245 bp downstream
Tmem151b	transmembrane protein 151B	mRNA-UTR
Tssr148205	transcription start site region 148205	1453 bp downstream