rs108652986 SNP Detail

Summary

• ID
  rs108652986
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:58993670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGTGGCATGT GAGATGACTG CAAAACTCCA GAAAAGACAT
  TGTCATGAGC AAGGGGCGAT CCTTGCAGAA ATGCCCAAGG TTCCATTGTG GGACTAGGTG
  C
  TTGTTGGCAT GCAGTGTTTG CCAACCAATG TGCACCCTAG ATGTCCACAT TTCCTCTCAT
  GGGAAACAGG GCAAGGGCAT CTGAGGACTT CAGGGAAGTC A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss144666798	ENSMUSSNP2725189	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108652986					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:58993670 () rs orientation: forward

Symbol	Name	Function Class
Del(7Ube3a-Snrpn)1Alb	Deletion, Chr 7, Beaudet 1	within coordinates
Gm24966	predicted gene, 24966	151 bp downstream
Gm25499	predicted gene, 25499	1628 bp upstream
Snhg14	small nucleolar RNA host gene 14	within coordinates