AAGAGTTGAG AACAGTGTGC CAAACTGTCA AACGATGCTC AGGGTTGTGA CCCACACATC CATCGGGAGG AGGCAGGGTG GTCCACCTGT ATTCTGATGA CAGAGCAGGT AGCAGTGTGG GTCCACAGTA GATATAAGAC AGGAGATTGT GTGTGCAGAG TCATTCCTCA AGAACTGCCC ATGCGTGTGT GTGTGTGTGT G TGTGTGTGTG TGTGTGTGTG TGCGCGAGTG CAGTTATTCC TCAAGTACTG TCCATGTGTG TATGTGTGTG TGTCCACGCG TGTGAGCGAG CGAGCACACA CATGCGTGCG TGCTCCTGAG TGTATGTGAG AACTTAGGAC TGTAAACTAA AGCATGAGAG AAACATTGGG TGTTCTGCTC CATAGTTCTC CACTTTATTC G = G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
AKR/J |
BALB/cByJ |
BALB/cJ |
BUB/BnJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LEWES/EiJ |
LG/J |
MA/MyJ |
MOLF/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SPRET/EiJ |
ST/bJ |
SWR/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss130885338 | NCBIM37_NT_039649_chr17_49177304 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G |
SNP Consensus Information | |||||||||||||||||||||||||||||||||||||||||||||||
SNP | Consensus Type | A/J |
AKR/J |
BALB/cByJ |
BALB/cJ |
BUB/BnJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LEWES/EiJ |
LG/J |
MA/MyJ |
MOLF/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SPRET/EiJ |
ST/bJ |
SWR/J |
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rs108653299 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss130885338 | NCBIM37_NT_039649_chr17_49177304 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | A/G |
Location: Chr17:49345007 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Lrfn2 | leucine rich repeat and fibronectin type III domain containing 2 | within coordinates | ||||||
Rr337874 | regulatory region 337874 | 295 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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