rs108657981 SNP Detail

Summary

• ID
  rs108657981
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:56800238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGGCAGA TCTCTGAATT
  CTTTTGCAAT GTTTAAAAAA AAAAGTGCTT GCAGTCTCTT TTTAAGAATG AAGGGGTTAG
  GGTCGTAGGA TACTGATTAA TGGAATATTC AGAAGGAAAC CTGTGGTAAT AACTGAATTG
  ATATGTAAAT AAAAGAGGTT AGCTATCCAG AGAGTTTTAA GAATAGCAAG AGAGCCAGGC
  R
  TGGTGGCGCA CGCCTTTAAT CCCAGCACTT GGGAAAGAGG TAGGCGGATT TGTGAGTTCG
  AGGCCAGCCT TGTCTACAAA GTGAGTTCCA GGACAGGCAG AGCTATACAG AGAAGCCCTG
  TCTCAAAAAA GGAAAAAAAA AAAAATATCA AGAGAAAGCT GTCTCAAGCA GAACAGAATG
  ATTTGGAAAG CTGTCTTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147172703	ENSMUSSNP1211938	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108657981					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:56800238 () rs orientation: forward

Symbol	Name	Function Class
Gm50289	predicted gene, 50289	612 bp upstream