C TAAGTGAATT GGCAAACAGA TATCCATGCA CATGTTCACC TAAAGACATT TTCACTTAGC CAGACACACT TAGGTGGCAC AGGCCTTTAA TCCCAGCACT Y AGGGGGCAGA GGCAGGCAAA TCTCGAGTTT GAGGCCAGCC TGGTCTACAG TGTGAGTTCT AGGATAGCCA GGGCTACACA GAGAAACCCT GTCTCAAAAC C Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
MSM/Ms |
---|---|---|---|---|---|---|---|
ss134252162 | ENSMUSSNP2985612 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | T |
SNP Consensus Information | |||||||
SNP | Consensus Type | A/J |
MSM/Ms |
||||
rs108658987 | SNP | C | T |
Location: ChrX:97724366 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ophn1 | oligophrenin 1 | within coordinates | ||||||
Rr5052 | regulatory region 5052 | 1835 bp proximal | ||||||
Rr8080 | regulatory region 8080 | 1987 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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