rs108669726 SNP Detail

Summary

• ID
  rs108669726
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46038138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTGTTTAT TCTGTATACA CACACACACA CACACACACA
  CACACACACA CACTCTCACA CATACATTCA GATTCACAAA TACACACACA CACATACACA
  Y
  TCACACATAC ACTCAGACTC ACAAATACAC AGACACACAC ACATACACAC ATACACACAT
  ATTCATATAC ACACTAACAT ACACTCAGAC TCACACACA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325403939	CHEV_17_45864161	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108669726					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46038138 () rs orientation: forward

Symbol	Name	Function Class
Gm35456	predicted gene, 35456	84 bp upstream
Rr331487	regulatory region 331487	within coordinates
Rr331488	regulatory region 331488	1663 bp proximal
Rr339881	regulatory region 339881	737 bp distal