rs108674389 SNP Detail

Summary

• ID
  rs108674389
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32724772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTTTGTG GCCTGATTTC
  CCCCTCTTCA GCCTGAAGGA TTCTATCAAG CATCTTCTGT AGAGCTGGCT CAGTGCTCAT
  AAATGCCTTT GTTCTATTTT TACCGCTGAT AGTTAAAAAA AATGTCCTTC TTTATGACAG
  ACAGCTTTTC TGGATGCAGC AGTCTGGGTT GGCAGTTATA GATATCTTTT ACGGCTTGAA
  R
  TCCGTCACTT GCGCATCCTT GGGCTTTTAC CCTTTCAGTT GAATGAATAA TAGTGTTATT
  CAGATGGGCC TGCCTTTGTA TTGTGAATGG TGTTTTTCTC TTGGAGCTCT CAACGTGGTG
  CTGCTGACCC GGAGCCCACA ACCCCCTCTC TCTTCTCGCC TGCCTGGATT TCCCCACGAC
  TGGCGGCTCA GCTTGACCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362203	CHEV_17_32642743	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108674389					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32724772 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f17	cytochrome P450, family 4, subfamily f, polypeptide 17	632 bp upstream
D17Mit63	DNA segment, Chr 17, Massachusetts Institute of Technology 63	572 bp distal
Rr392523	regulatory region 392523	within coordinates
Rr525769	regulatory region 525769	within coordinates
Tssr143717	transcription start site region 143717	621 bp upstream
Tssr143718	transcription start site region 143718	648 bp upstream
Tssr143719	transcription start site region 143719	676 bp upstream