rs108675764 SNP Detail

Summary

• ID
  rs108675764
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153361420 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAAGGCTTG CGAGTGCAGC AGGCACGGGT CTTGGGTTCT
  AACAACATCA CCAAAACAAA ACCACCCATA AACGCCCCCC CCCCACTCCC GCAGCCCCTC
  W
  ACCCAGGGTT TCAGAGAAGC TCCAGGTTTG ACTTCTCCCA TCCAGCTTCT CCCGCTGCCT
  CAAAGAGGTG TCACCAGAGC TAGACAGTGG CCTGACTTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147995266	ENSMUSSNP4111726	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108675764					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153361420 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nol4l	nucleolar protein 4-like			Intron
				Noncoding-Transcript-Variant
Rr567668	regulatory region 567668			352 bp proximal