rs108676894 SNP Detail

Summary

• ID
  rs108676894
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102058701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTATTGTTG GACTCTACCA
  GATAAGGATC AAAGTTGGGT TCAAAATTCA GAGATTAAAA TCCTTGGTAA CAAAAACCTT
  TCCCTTAAAG CCTGGCCCAG GTATCTCTGG TCTGATCCTT ATCAGAGTTC AATTCATACC
  CTGGGTGGGA CAGTGCCTGC CATGGCTGCA TCCTTGCTGG TGTCCCACAC TCTGTGAACA
  S
  TTAAAATTAA CTTTAGTTAA GCAGGTCATA CTTTTGGTGT TCCAGAGGAT CTGAAAAGTT
  AAAGCATGGA GTAACCTTTA TAAAAATAAG ATATTATTAA CATTACAGGT TTTTGTGGTC
  CCATTTTTAG GCACAGTGAT CATACTAGAT GACTATTCCT TCATGTCTAT AACGGAGGGG
  CAACAGCACC TGAAGGCAAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135554439	ENSMUSSNP3513077	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108676894					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102058701 () rs orientation: forward

Symbol	Name	Function Class
Gm65665	predicted gene, 65665	within coordinates
Rr582191	regulatory region 582191	1079 bp distal
Rr582192	regulatory region 582192	814 bp proximal