rs108678188 SNP Detail

Summary

• ID
  rs108678188
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:19584540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGCAGAA GTGTTTTGTT
  TTCATGAAGT CTCCCTTTTC AATTGTCGGC CTTAATTCTT GGATAAATGA AATCCTATTC
  AGGAAGTGTT TTCCTATACC AATATCACTT TCAATACTGT CTATATTTTC TACTAATACT
  TTGAATGTTT CAAGTTTCAC CCTTAGGTTT TCTATCTAAC TGGAATTAGT TTTTGTGCAA
  R
  GTAAAGGTGA TAGATACAGG TCTAATTTCC TTCTGCTGCA TGTAAATATC TGCTTTTCAC
  AGCAACATTT GTTCACACAC ACACACACAA ATATATATAT ATATATATAT ATATATATAT
  ATATATATAT ATATATATAT CTTTTTGCTC AGTGTTGTTC TGCTATCTGG TGTCTTTGTG
  ATTTCATATA AATTTTAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146812299	ENSMUSSNP2469601	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108678188					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:19584540 () rs orientation: forward

Symbol	Name	Function Class
Gm7718	predicted gene 7718	within coordinates
Rr393367	regulatory region 393367	854 bp upstream