rs108678363 SNP Detail

Summary

• ID
  rs108678363
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:39253641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTAACCA AAAGCTACAC
  ATTACCGAAA AATTTGAACC TCATGTAAGC GTGCAAGGCA TAATGAAATC GATTGCTGAG
  GACAGTGTGG CTTTAAAGTG TTAGCTCCTT GTTTCGAACA TTGTCAATAT TTTGGCATTG
  CTCATAGGGA GTATTGCTGC TTCTCATGAT TCCATGAGTG AAATTGTCAC ATGAATTATA
  Y
  GTCTTGTTGT GTGACATTTA AATTAAAAAT GAAGGTGATG TGTATTCAGA AGAAGTTATT
  CATGCTATTA ATTTAATGGA TTAAATTAAA CATTTTAATT ATCATGAGTG GTTCTACTAG
  TTACTACTTA AATATCTGAA CAGGGATTGC ATTGTGCATT TTAAATTTCT TAAATTAACT
  TATCTTTTTG TATGCATGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss148902945	ENSMUSSNP3710399	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss324322208	CHEV_13_39161534	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs108678363					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:39253641 () rs orientation: forward

Symbol	Name	Function Class
Gm60523	predicted gene, 60523	within coordinates
Rr388296	regulatory region 388296	within coordinates