rs108686043 SNP Detail

Summary

• ID
  rs108686043
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:56800099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTAAGTTT TTGTTTGTGC
  TTCCTGAGTT CAAGGATATC CTGAGACAGA GGGAGTTTAG GTTCAGGTCC AGGTATGGTA
  TGAATGGTAA TTTCAGGGTG GGGTCTCACC CAGCTACCTT ATGGTCTGTA TTTAACAAAG
  GCAGGCAGAT CTCTGAATTC TTTTGCAATG TTTAAAAAAA AAAGTGCTTG CAGTCTCTTT
  Y
  TAAGAATGAA GGGGTTAGGG TCGTAGGATA CTGATTAATG GAATATTCAG AAGGAAACCT
  GTGGTAATAA CTGAATTGAT ATGTAAATAA AAGAGGTTAG CTATCCAGAG AGTTTTAAGA
  ATAGCAAGAG AGCCAGGCAT GGTGGCGCAC GCCTTTAATC CCAGCACTTG GGAAAGAGGT
  AGGCGGATTT GTGAGTTCGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147172664	ENSMUSSNP3641072	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108686043					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:56800099 () rs orientation: forward

Symbol	Name	Function Class
Gm50289	predicted gene, 50289	751 bp upstream