rs108689547 SNP Detail

Summary

• ID
  rs108689547
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:163642694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GTGTGTGTGT ATGTGTGTGT GTGTGTGTGT CTGTCTGTGT
  GCCTGTCTCT GTGTGTGTGT GTGTGTGTTT GTCTGTCTGT CTGTCTCTGT GTGTGTGTCT
  M
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TAGGGCAATG
  CCCAAGAAGC AAGTGGAGTC CAGGCCACCA GGCTTGGGTT C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148212778	ENSMUSSNP2023700	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108689547					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163642694 () rs orientation: forward

Symbol	Name	Function Class
Rr569492	regulatory region 569492	1909 bp distal
Rr569493	regulatory region 569493	96 bp proximal