rs108691270 SNP Detail

Summary

• ID
  rs108691270
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:116589255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTCCAGG TTCATTTTCC
  TCAGATGGGG AGGTGAACTT CAAAGAAGCA ATTATGTCCA CAGAAGCATC TAGACTACTG
  GACAAAGTAT CCACATGGTG GCTGCAGATG TTCCATGTCC ATAATCCTGA TTCTTCATAA
  TGCACAAAAT GTCTCCCCAA GACTCATGGT AGACTGCACT TGAGGGTGAT ATCCTGGCCC
  Y
  ACCCATTTCC AGCCCCAGAT TCCCTTCCTG TCTGTGGTTG GGTTGTAGCT CACCACCAAG
  CTTCCCAGAT GCCAAGTCTT TCCCACACTG ATGGATCTGT ATCCCTCTCA ACAGTGACTC
  AGAAAAAAAA ACCTCTTTTC CTTAAGTAGC TTCTCTCAGA TGTTTGGTTA CTACAAGAGA
  AGTAACCCAC ACACCCTAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145742549	ENSMUSSNP3469473	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108691270					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:116589255 () rs orientation: forward

Symbol	Name	Function Class
Rr381374	regulatory region 381374	733 bp upstream