rs108699976 SNP Detail

Summary

• ID
  rs108699976
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:36415594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGGGGAGTC CTTACCCAGG TTTTGGGACC ATGGAAGCGC
  CCAGTAACCT ACTTATCAAA GAAACTGGAC CCTGTGGCCA GTGGATGGCC CTCCTGCCTG
  Y
  GAGCGATAGC AGCCACGGCT GTGCTAGTAA GAGATGCTGA CAAACTGACT ATGGGCCAGA
  ATGTTACTAT AGTGGCCCCA CATTCTCTTG AGAGCATCG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145549804	ENSMUSSNP5838139	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108699976					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:36415594 () rs orientation: forward

Symbol	Name	Function Class
Gm54002	predicted gene, 54002	within coordinates
Rr392573	regulatory region 392573	1072 bp upstream