rs108700402 SNP Detail

Summary

• ID
  rs108700402
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8412056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCATGTAT GGAACTTACT
  TAAGCAAAGG TAACTTAGCA ATGACTACAG CACCAAGGAA AGTTACTCCT AACAATGAGC
  CCAGGCTGTA TGTCGTTTCC CCCACCCCTA ACCGAATGCT GATGGCTCAG TCTTGTGTAG
  GGAACGAAAG CTGCTTTTGC TCTTGCTTTG ATGCATGTGT CACATCTGGA TGACAGCGTT
  Y
  CACAGCGCTC TTTCCTGTCC TCTGGCTTTT TGCCCCCTTT TGCAATGGTC CTTGAGTTCC
  TGGAGGGGTG ATGTTGGTGT CCTGTTTAGG GCTGGGCACT CAATAGTCAC TTATGCTCAG
  TCCAATATGT TTAATTTTGA TACATTTATC TCATTTTTCT TTAAAAGCCT GTGCTTTTAG
  AATCATGGAG TTTCCAGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss137108470	ENSMUSSNP2373127	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108700402					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8412056 () rs orientation: forward

Symbol	Name	Function Class
Gm33134	predicted gene, 33134	1882 bp upstream