rs108703988 SNP Detail

Summary

• ID
  rs108703988
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180999260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAACATCAT ATGTGTTACG
  TTTTAGAGTC TTGGAACATA TGTAAGTATG CCAACACCCT ACATAAACTA GCACTTTCTT
  TTTTGGGGGG TGGGGGGTGT CTTGCTATGT AGCTCAGGCT AGGTTCAAAC CCACAAATAT
  TCTGCCTCAC CTTCCTGGGT AGTAACTTTA CTACTTGGCA TTTCTTTATA TTAAATAATC
  Y
  ATTAGGGCTC AAATTTCCCC CATGGCTCAA AAGTTCTGCA GTTGGTTTGT TAACAGTGAT
  CTAAAACAAG GCCTATATAT TTGAGCAATG TCTATAAAGC TTTTATTTCA CTGCAGAGGT
  CAGAAGAGGG ACTGGAGTTA CAGGTGGTTA TGAGCCACCG AGTGGGTGCT GAGAATTGAA
  CTGGGTCCTC TTGAAGTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146392211	ENSMUSSNP848712	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108703988					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180999260 () rs orientation: forward

Symbol	Name	Function Class
Rr424693	regulatory region 424693	1088 bp distal
Wdr26	WD repeat domain 26	1533 bp downstream