rs108712531 SNP Detail

Summary

• ID
  rs108712531
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88813904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACTT ATTTATAATA ATAAATAAAT
  C
  GAAAAAAGAA AAGAAAAGGT AGAGA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss132546782	ENSMUSSNP3607121	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108712531					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88813904 () rs orientation: forward

Symbol	Name	Function Class
Scpep1	serine carboxypeptidase 1	942 bp downstream
Scpep1os	serine carboxypeptidase 1, opposite strand	within coordinates
Tssr110047	transcription start site region 110047	1190 bp downstream
Tssr110048	transcription start site region 110048	1205 bp downstream
Tssr110049	transcription start site region 110049	1259 bp downstream
Tssr110050	transcription start site region 110050	1461 bp downstream
Tssr110051	transcription start site region 110051	1502 bp downstream
Tssr110052	transcription start site region 110052	1526 bp downstream
Tssr110053	transcription start site region 110053	1554 bp downstream
Tssr110054	transcription start site region 110054	1621 bp downstream