rs108741736 SNP Detail

Summary

• ID
  rs108741736
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100590407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTTCTTT TTCAATTTGG
  GGATATGTTC TTGAATTTGC ATCTGTAAGG ACTACACATT TCTATTTGCT ATTGATTTCT
  AAATTTATTA CCCTGTACTC AGAGAACACA CTTCTTAATG TTTTAAACTC CTTTAACTTT
  TGAGGTTTTT AAGGTGTGGA AAATGGCCTA TTTTAATGTT CCAAATAGAT GTACTTTGTT
  R
  TTGTTCCAAA ATATTCTGTA CTTTGTTGTT ACTGGGGCTG TTTAAGAGAA TTCTATACAA
  GCCTATCACA AGTGTAGGTA AAGTGCTGAT TTTTATCTCC TTTTTGATAT TTTCCTAGGT
  ATGTTTACAA TTATTGAAGT AAGACAGTAT TATTGCATTG TCTATTTCTC CTTCTATTTC
  TTTCAGTTTT TGCTTTATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss137995779	ENSMUSSNP1954423	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs108741736					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100590407 () rs orientation: forward

Symbol	Name	Function Class
Gm48585	predicted gene, 48585	637 bp downstream
Gm48586	predicted gene, 48586	415 bp upstream
Rps6ka5	ribosomal protein S6 kinase, polypeptide 5	within coordinates