rs108742743 SNP Detail

Summary

• ID
  rs108742743
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28222911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAGAGAC AGCCCACCTC
  CCCTGTGCAG ATCCTCTGTC TCCTGGAAGG ACTGACTGTG GGAGGAGAAG GAGGCTCTGT
  TCTCTGCTCC TCCAAGAGCT CTGGGCAGGA TTTGGATGCC TGCTTCCTGG GGACTTGCCT
  GCCTCTCTCA AACCTGGCAA GGCTTCCCTT CCCCTTCAAA GCCCAGGTTA GAGTCCACCA
  M
  CCCCAGAAGC TCCCAACTCA TCCCAGTCAC ACCTGACCTG CCTCAGAGCA TCGGTCCACC
  GCTGCATTCC ATTCCTGAAC CTGCCTTCCT TTTCCTGCAT TGAGCCAGGC ATGTCTCCTT
  CATCTCTGTA TTACTTGGGC AGGCCCCTGA AGGCAGAGAT ACACACACTC ACTCACAGAG
  TCAGTGAGGA CATGTAGCCG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325351167	CHEV_17_28140882	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108742743					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28222911 () rs orientation: forward

Symbol	Name	Function Class
Anks1	ankyrin repeat and SAM domain containing 1	within coordinates
Gm35290	predicted gene, 35290	1575 bp upstream
Rr340975	regulatory region 340975	within coordinates