rs108753605 SNP Detail

Summary

• ID
  rs108753605
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:88275589 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGACGACA TACACTTAGG
  TCCTTGGATG TGATCCCTTG TCAGAGCAGC CGTGTTGCTG GATTAAAATT CCTCTACAAT
  TGTTCTTTCA AGATCCCTGA AGAATTGTGT TGCGCTTTTG ACGGGGATTG CGCTGATTGC
  AGATTGCTTT TGGTAGGATG GCCGTTTTTA CTTTATTAAT CCTGCTAATC TATGTGCATG
  S
  GACATCTTTC TGTCTTCTGA TTCCCTTTCC TCCTCCTCCT CCTCTTCCTC TTCCTTCTCT
  TACTGCTAAT GTGTGTCTTT TTTTTTTTTA GATGCACTTT TTTTTTTCTT TTTTAATTTT
  AAATTTTCTT CCACATCCTG AATGCTACAT TTGATTTTTG GTTTCTTTTG TTTTGGGGGG
  CAAGGTCTCT TTATTATTTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325500509	CHEV_17_88367501	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108753605					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:88275589 () rs orientation: forward

Symbol	Name	Function Class
Gm50041	predicted gene, 50041	843 bp downstream
Rr333904	regulatory region 333904	212 bp proximal
Rr343663	regulatory region 343663	325 bp proximal