rs108758708 SNP Detail

Summary

• ID
  rs108758708
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6881916 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G CATCGCCATG GTGTCAGCTT GAGTCTGTGG GAAAGCTCAT
  ACAGTGCTGA AGCTCTAGTT CCGCTGTGCC CACATCCGGT CCATAGCTTG TTGCTCTTGC
  Y
  GTCCCTGTCT GAGGTCAGGC TGAGGGACAG CAGCTGTGTT GGGATGAACG GGGCTTCTGT
  TGTGTCCCTT GTGACTGAGC TCCAGCTGTC AGGTGCTCGG G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145090434	ENSMUSSNP2931917	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss145092749	ENSMUSSNP1914250	ENSEMBL	ENSEMBL_Sanger	r	SNP		G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108758708					SNP	C	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6881916 () rs orientation: reverse

Symbol	Name	Function Class
Rr521399	regulatory region 521399	1343 bp proximal
Tmem181c-ps	transmembrane protein 181C, pseudogene	within coordinates