rs108767812 SNP Detail

Summary

• ID
  rs108767812
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:24791402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GGAATACATG TTTCCTAGTT TTATAGCTGT TTTGATTTCC
  ACATCCTGAA TTTCATACCA GAAAGGAACT GCTGGGATAC ATACTTACTG GAAAAAAAAT
  W
  TTTTTTTTTT CTAAAAGAAC AAGCCCTTGG GAGGAGAAGG CGTTTGCTTA GTTCTGTCTG
  CTTTGCTGTG ATGCCCCAGA TGGTTTTCAT GTGGCGCATT C                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146998875	ENSMUSSNP5406146	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108767812					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:24791402 () rs orientation: forward

Symbol	Name	Function Class
Arg1	arginase, liver	mRNA-UTR
Tssr92746	transcription start site region 92746	116 bp upstream
Tssr92747	transcription start site region 92747	189 bp upstream
Tssr97085	transcription start site region 97085	11 bp upstream
Tssr97086	transcription start site region 97086	34 bp downstream
Tssr97087	transcription start site region 97087	68 bp downstream
Tssr97088	transcription start site region 97088	126 bp downstream
Tssr97089	transcription start site region 97089	145 bp downstream
Tssr97090	transcription start site region 97090	176 bp downstream
Tssr97091	transcription start site region 97091	567 bp downstream
Tssr97092	transcription start site region 97092	587 bp downstream
Tssr97093	transcription start site region 97093	611 bp downstream
Tssr97094	transcription start site region 97094	627 bp downstream
Tssr97095	transcription start site region 97095	641 bp downstream
Tssr97096	transcription start site region 97096	906 bp downstream
Tssr97097	transcription start site region 97097	1180 bp downstream
Tssr97098	transcription start site region 97098	1328 bp downstream