rs108770438 SNP Detail

Summary

• ID
  rs108770438
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:56800119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTGAGTT CAAGGATATC
  CTGAGACAGA GGGAGTTTAG GTTCAGGTCC AGGTATGGTA TGAATGGTAA TTTCAGGGTG
  GGGTCTCACC CAGCTACCTT ATGGTCTGTA TTTAACAAAG GCAGGCAGAT CTCTGAATTC
  TTTTGCAATG TTTAAAAAAA AAAGTGCTTG CAGTCTCTTT TTAAGAATGA AGGGGTTAGG
  R
  TCGTAGGATA CTGATTAATG GAATATTCAG AAGGAAACCT GTGGTAATAA CTGAATTGAT
  ATGTAAATAA AAGAGGTTAG CTATCCAGAG AGTTTTAAGA ATAGCAAGAG AGCCAGGCAT
  GGTGGCGCAC GCCTTTAATC CCAGCACTTG GGAAAGAGGT AGGCGGATTT GTGAGTTCGA
  GGCCAGCCTT GTCTACAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147172669	ENSMUSSNP501273	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108770438					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:56800119 () rs orientation: forward

Symbol	Name	Function Class
Gm50289	predicted gene, 50289	731 bp upstream