rs108773866 SNP Detail

Summary

• ID
  rs108773866
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18339067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCTGCCTT CTAGCTGAGG
  ATGAAGGCCC GAAAAGACCC TGTCCAAGAA GCTCTGTTGC TTTTGCTACC CATGTACTCT
  TCTGCTTAGA CTGGTTTCAA TGACCCCAAG ATCCTGGGTG TGCTAGGGCC CCCTGAGTTC
  ACACCCAAGA TGGCACGGGG TTAGCGCCAA CCAGAACGAA CCTCAGCCAA TAGTCAGGCA
  K
  GTTTCCTTTG TCCCTGTTCC TGCTGGCACA AGACCCTCCA GGATTTTTTG GAGCAGATGT
  TGCATTCCAC TCACCAGGGA TCTCAAGATC CTGGGTGTGC TAGGGTGCCT ACAGCATGGA
  GAGTCCTCTA GGGACCTTGG GACCCTCTGT CGAATACAAG CCCAAGATGG TGCTTTCTAC
  TTTGGACTTT TAACATTTGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148453503	ENSMUSSNP2477845	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108773866					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18339067 () rs orientation: forward

Symbol	Name	Function Class
Psg23	pregnancy-specific beta-1-glycoprotein 23	1201 bp downstream
Tssr2096	transcription start site region 2096	1896 bp downstream